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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908564.1_cds_XP_016458702.1_52301
CDS Infomation

[gene=LOC107782340] [db_xref=GeneID:107782340] [protein=probable trehalose-phosphate phosphatase J isoform X2] [protein_id=XP_016458702.1] [location=join(44528..44767,45316..45461,45732..45798,45950..46042,46284..46340,46443..46544,46973..47120,47234..47304,47707..47799,48074..48181)] [gbkey=CDS]
Sequence

ATGACCAAACAGAATGTGGTGGATTCGGATGCTAAAGCGGGTGTCAACACCGCCACGTTC
ACGGCGGCGGTGCAGAAGCCACCACCGGCGCCGGGAAGTTGCATCAACATTTCAAGAAAG
ACGCTAGTTGAAATAAATAGTGGTCCAAGAATCAACAATAATTGGGTTGATTCAATGAGA
GCTTCATCTCCAACTCATCACAAGTACACTTCTCTTTCTGAAGACAATACTTCTTGGATG
GTGCACCATCCATCAGCACTGAACATGTTTGAGCAGATAATCGGTGCTTCTAAAGGAAAG
AAAATGGTGATGTTTTTAGACTATGATGGCACCCTTTCCCCCATTGTNATCATACACAAC
CTTACCCTACATTTCTGCAAGAGGTTAGGAACAGTGAGAAAGCTTGCTAGATATTTCCCT
ACTGCTATAGTTAGTGGGAGGTGTAGAGACAAGGTATATAGTTTTGTACAATTGGCAGAG
TTGTACTATGCTGGAAGCCATGGCATGGATATAGAAGGTCCTTCAAAAGGTTCCAAATAC
AAGAAAGAAGCTCAAGCTGTTCTTTTCCAACCAGCAAGTGATTTTCTCCCCATGATTGAT
GAGGTTTACAAAGAATTGTTGGATAAAACAAAGTGTATTGAAGGTGTTAGAGTGGAGAAT
AACAAGTTTTGTGTCTCTGTCCATTTCCGCTGTGTTGATGAAAAGGAATGGGGTGAACTA
GCACAACATGTAAGGTCAGTGCTAAAAGAATATCCCAAGCTTCGATTAAGCCAAGGGAGA
AAAGTATTAGAGATTCGTCCAATTATTAAATGGGACAAAGGAAAAGCTCTTGAATTTTTG
CTTGACTCCCTTGGGTACGCTAATTGTACTAATGTCTTTCCTGTATATATTGGAGATGAT
CGAACTGATGAAGATGCTTTCAAGGTATTAAGAGAAAGAGGGCAAGGTTTTGGCATTCTT
GTCTCCAAAACTCCAAAAGACACATACGCATCCTATTCTTTACAAGAACCATCCGAGGTT
ATGATTTTTCTACGACGGTTAGTAGAGAGGAAAAAGTTGTGTTTAAGGAGACAGTCTAAG
ATTCAAAAACAAATTGAGGAGATAAAAGCATCTCAAAAGAACTAA

Peptide Sequence

PEP ID

XP_016458702.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase J isoform X2 [Nicotiana tabacum]
Sequence

MTKQNVVDSDAKAGVNTATFTAAVQKPPPAPGSCINISRKTLVEINSGPRINNNWVDSMR
ASSPTHHKYTSLSEDNTSWMVHHPSALNMFEQIIGASKGKKMVMFLDYDGTLSPIVIIHN
LTLHFCKRLGTVRKLARYFPTAIVSGRCRDKVYSFVQLAELYYAGSHGMDIEGPSKGSKY
KKEAQAVLFQPASDFLPMIDEVYKELLDKTKCIEGVRVENNKFCVSVHFRCVDEKEWGEL
AQHVRSVLKEYPKLRLSQGRKVLEIRPIIKWDKGKALEFLLDSLGYANCTNVFPVYIGDD
RTDEDAFKVLRERGQGFGILVSKTPKDTYASYSLQEPSEVMIFLRRLVERKKLCLRRQSK
IQKQIEEIKASQKN

Transcript Sequence

Gene sequence data has not been registered.